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Academic Journal

Likelihood-based inference for discretely observed birth-death-shift processes, with applications to evolution of mobile genetic elements.

  • Authors : Xu J; Department of Statistics, University of Washington, Seattle, WA, U.S.A.; Guttorp P

Subjects: Evolution, Molecular* ; Interspersed Repetitive Sequences* ; Likelihood Functions*

  • Source: Biometrics [Biometrics] 2015 Dec; Vol. 71 (4), pp. 1009-21. Date of Electronic Publication: 2015 Jul 06.Publisher: Biometric Society Country of Publication: United States NLM ID: 0370625 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

A maximum pseudo-likelihood approach for phylogenetic networks.

Subjects: Evolution, Molecular* ; Likelihood Functions* ; Phylogeny*

  • Source: BMC genomics [BMC Genomics] 2015; Vol. 16 Suppl 10, pp. S10. Date of Electronic Publication: 2015 Oct 02.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Maximum likelihood inference of reticulate evolutionary histories.

  • Authors : Yu Y; Departments of Computer Science and .; Dong J

Subjects: Computer Simulation* ; Evolution, Molecular* ; Likelihood Functions*

  • Source: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2014 Nov 18; Vol. 111 (46), pp. 16448-53. Date of Electronic Publication: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets.

Subjects: Algorithms* ; Amino Acid Substitution* ; Evolution, Molecular*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2014 Oct 24; Vol. 15, pp. 341. Date of Electronic Publication: 2014 Oct 24.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Models of gene gain and gene loss for probabilistic reconstruction of gene content in the last universal common ancestor of life.

Subjects: Evolution, Molecular* ; Genome* ; Likelihood Functions*

  • Source: Biology direct [Biol Direct] 2013 Dec 19; Vol. 8, pp. 32. Date of Electronic Publication: 2013 Dec 19.Publisher: BioMed Central Country of Publication: England NLM ID: 101258412 Publication Model: Electronic Cited Medium: Internet ISSN: 1745-6150

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Academic Journal

Random roots and lineage sorting.

  • Authors : Rosenfeld JA; IST/High Performance and Research Computing, University of Medicine and Dentistry of New Jersey, Newark, NJ 07103, USA. ; Payne A

Subjects: Evolution, Molecular* ; Likelihood Functions* ; Phylogeny*

  • Source: Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2012 Jul; Vol. 64 (1), pp. 12-20. Date of Electronic Publication: 2012 Mar 14.Publisher: Academic Press Country of Publication: United States NLM ID: 9304400 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

BadiRate: estimating family turnover rates by likelihood-based methods.

  • Authors : Librado P; Departament de Genètica and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain.; Vieira FG

Subjects: Evolution, Molecular* ; Likelihood Functions* ; Software*

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2012 Jan 15; Vol. 28 (2), pp. 279-81. Date of Electronic Publication: 2011 Nov 10.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

  • Authors : Tamura K; Department of Biological Sciences, Tokyo Metropolitan University, Hachioji, Tokyo, Japan.; Peterson D

Subjects: Evolution, Molecular* ; Likelihood Functions* ; Models, Genetic*

  • Source: Molecular biology and evolution [Mol Biol Evol] 2011 Oct; Vol. 28 (10), pp. 2731-9. Date of Electronic Publication: 2011 May 04.Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood.

  • Authors : Berger SA; The Exelixis Lab, Scientific Computing Group, Heidelberg Institute for Theoretical Studies, Schloss-Wolfsbrunnenweg 35, D-69118 Heidelberg, Germany.; Krompass D

Subjects: Algorithms* ; Evolution, Molecular* ; Likelihood Functions*

  • Source: Systematic biology [Syst Biol] 2011 May; Vol. 60 (3), pp. 291-302. Date of Electronic Publication: 2011 Mar 23.Publisher: Oxford University Press Country of Publication: England NLM ID: 9302532 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Maximum likelihood models and algorithms for gene tree evolution with duplications and losses.

  • Authors : Górecki P; Institute of Informatics, Warsaw University, Warsaw 02-097, Poland. ; Burleigh GJ

Subjects: Algorithms* ; Evolution, Molecular* ; Gene Duplication*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2011 Feb 15; Vol. 12 Suppl 1, pp. S15. Date of Electronic Publication: 2011 Feb 15.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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  • 1-10 of  1,656 results for ""Likelihood Functions""