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Academic Journal

Gene regulatory networks in disease and ageing.

  • Authors : Unger Avila P; Cluster of Excellence on Cellular Stress Responses in Aging-associated Diseases (CECAD), University of Cologne, Cologne, Germany.; Padvitski T

Subjects: Gene Regulatory Networks* ; Aging*/Aging*/Aging*/genetics; Humans

  • Source: Nature reviews. Nephrology [Nat Rev Nephrol] 2024 Sep; Vol. 20 (9), pp. 616-633. Date of Electronic Publication: 2024 Jun 12.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101500081 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

COFFEE: consensus single cell-type specific inference for gene regulatory networks.

  • Authors : K Lodi M; Integrative Life Sciences, Virginia Commonwealth University, 1000 W Cary St, Richmond, VA 23284, United States.; Chernikov A

Subjects: Gene Regulatory Networks* ; Algorithms* ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Sep 23; Vol. 25 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Dynamic atlas of histone modifications and gene regulatory networks in endosperm of bread wheat.

  • Authors : He C; National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, 430070, China.; Bi S

Subjects: Triticum*/Triticum*/Triticum*/genetics ; Triticum*/Triticum*/Triticum*/metabolism ; Endosperm*/Endosperm*/Endosperm*/genetics

  • Source: Nature communications [Nat Commun] 2024 Nov 06; Vol. 15 (1), pp. 9572. Date of Electronic Publication: 2024 Nov 06.Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

From Noise to Knowledge: Diffusion Probabilistic Model-Based Neural Inference of Gene Regulatory Networks.

  • Authors : Zhu H; Department of Computer Science, Tufts University, Medford, Massachusetts, USA.; Slonim D

Subjects: Gene Regulatory Networks* ; Neural Networks, Computer* ; Models, Statistical*

  • Source: Journal of computational biology : a journal of computational molecular cell biology [J Comput Biol] 2024 Nov; Vol. 31 (11), pp. 1087-1103. Date of Electronic Publication: 2024 OctPublisher: Mary Ann Liebert, Inc Country of Publication: United States NLM ID: 9433358 Publication Model: Print-Electronic Cited Medium: Internet

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Academic Journal

Scalable identification of lineage-specific gene regulatory networks from metacells with NetID.

  • Authors : Wang W; Human Phenome Institute, Fudan University, Shanghai, China.; Institute of Computational Biology, Helmholtz Center Munich, Munich, Germany.

Subjects: Gene Regulatory Networks* ; Single-Cell Analysis* ; Cell Lineage*/Cell Lineage*/Cell Lineage*/genetics

  • Source: Genome biology [Genome Biol] 2024 Oct 18; Vol. 25 (1), pp. 275. Date of Electronic Publication: 2024 Oct 18.Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

BootCellNet, a resampling-based procedure, promotes unsupervised identification of cell populations via robust inference of gene regulatory networks.

  • Authors : Kumagai Y; Cellular and Molecular Biotechnology Research Institute, National Institute of Advanced Industrial Science and Technology, Higashi, Tsukuba, Ibaraki, Japan.

Subjects: Gene Regulatory Networks*/Gene Regulatory Networks*/Gene Regulatory Networks*/genetics ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; COVID-19*/COVID-19*/COVID-19*/genetics

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Sep 30; Vol. 20 (9), pp. e1012480. Date of Electronic Publication: 2024 Sep 30 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

scMGATGRN: a multiview graph attention network-based method for inferring gene regulatory networks from single-cell transcriptomic data.

  • Authors : Yuan L; Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, 250353, Shandong, China.; Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), 3501 Daxue Road, 250353, Shandong, China.

Subjects: Gene Regulatory Networks* ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; Transcriptome*

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Sep 23; Vol. 25 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Inferring gene regulatory networks with graph convolutional network based on causal feature reconstruction.

  • Authors : Ji R; School of Automation and Information Engineering, Xi 'an University of Technology, No.5, Jinhua South Road, Xi'an, 710048, Shaanxi, China. .; Key Laboratory of Shaanxi Province for Complex System Control and Intelligent Information Processing, Xi'an, 710048, Shaanxi, China. .

Subjects: Gene Regulatory Networks* ; Algorithms* ; Computational Biology*/Computational Biology*/Computational Biology*/methods

  • Source: Scientific reports [Sci Rep] 2024 Sep 12; Vol. 14 (1), pp. 21342. Date of Electronic Publication: 2024 Sep 12.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Multi-objective context-guided consensus of a massive array of techniques for the inference of Gene Regulatory Networks.

  • Authors : Segura-Ortiz A; Department de Lenguajes y Ciencias de la Computación, ITIS Software, Universidad de Málaga, Málaga, 29071, Spain. Electronic address: .; García-Nieto J

Subjects: Gene Regulatory Networks* ; Algorithms*; Computational Biology/Computational Biology/Computational Biology/methods

  • Source: Computers in biology and medicine [Comput Biol Med] 2024 Sep; Vol. 179, pp. 108850. Date of Electronic Publication: 2024 Jul 15.Publisher: Elsevier Country of Publication: United States NLM ID: 1250250 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Genome-wide RNA-seq, DNA methylation and small RNA-seq analysis unraveled complex gene regulatory networks in psoriasis pathogenesis.

  • Authors : Laha S; Human Genetics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata, West Bengal 700108, India.; Das S

Subjects: Psoriasis*/Psoriasis*/Psoriasis*/genetics ; Psoriasis*/Psoriasis*/Psoriasis*/pathology ; DNA Methylation*

  • Source: Gene [Gene] 2025 Jan 15; Vol. 933, pp. 148903. Date of Electronic Publication: 2024 Sep 02.Publisher: Elsevier/North-Holland Country of Publication: Netherlands NLM ID: 7706761 Publication Model: Print-Electronic Cited Medium: Internet

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  • 1-10 of  109,049 results for ""GENE regulatory networks""