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Examining the molecular clock hypothesis for the contemporary evolution of the rabies virus.

Authors : Durrant, Rowan¹ (AUTHOR) ; Cobbold, Christina A.^1,2 (AUTHOR); Brunker, Kirstyn¹ (AUTHOR)

Subjects: *MOLECULAR clock; *RABIES virus; *VIRAL variation

Source: PLoS Pathogens. 11/25/2024, Vol. 20 Issue 11, p1-15. 15p.

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Assessing the effect of model specification and prior sensitivity on Bayesian tests of temporal signal.

Authors : Tay, John H.¹ (AUTHOR); Kocher, Arthur^2,3 (AUTHOR); Duchene, Sebastian^1,4 (AUTHOR)

Subjects: *MOLECULAR clock; *SIGNAL detection; *PHYLOGENETIC models

Source: PLoS Computational Biology. 11/6/2024, Vol. 20 Issue 11, p1-22. 22p.

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The evolutionary and transmission dynamics of HIV-1 CRF08_BC.

Authors : Li, Xingguang^1,2 (AUTHOR) ; Trovão, Nídia S.³ (AUTHOR)

Subjects: *MOLECULAR clock; *INFECTIOUS disease transmission; *HIV

Source: PLoS ONE. 9/6/2024, Vol. 19 Issue 9, p1-13. 13p.

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Academic Journal

Clock-dependent chromatin accessibility rhythms regulate circadian transcription.

Authors : Yuan, Ye¹ (AUTHOR) ; Chen, Qianqian² (AUTHOR); Brovkina, Margarita¹ (AUTHOR)

Subjects: *MOLECULAR clock; *CIRCADIAN rhythms; *CLOCK genes

Source: PLoS Genetics. 5/28/2024, Vol. 20 Issue 5, p1-29. 29p.

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TimeTeller: A tool to probe the circadian clock as a multigene dynamical system.

Authors : Vlachou, Denise¹ (AUTHOR); Veretennikova, Maria¹ (AUTHOR); Usselmann, Laura² (AUTHOR)

Subjects: *CLOCK genes; *MOLECULAR clock; *DYNAMICAL systems

Source: PLoS Computational Biology. 2/29/2024, Vol. 20 Issue 2, p1-29. 29p.

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Academic Journal

MYC disrupts transcriptional and metabolic circadian oscillations in cancer and promotes enhanced biosynthesis.

Authors : Cazarin, Juliana¹ (AUTHOR); DeRollo, Rachel E.¹ (AUTHOR); Shahidan, Siti Noor Ain Binti Ahmad¹ (AUTHOR)

Subjects: *CLOCK genes; *MOLECULAR clock; *BIOSYNTHESIS

Source: PLoS Genetics. 8/28/2023, Vol. 19 Issue 8, p1-36. 36p.

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Academic Journal

CIRCUST: A novel methodology for temporal order reconstruction of molecular rhythms; validation and application towards a daily rhythm gene expression atlas in humans.

Authors : Larriba, Yolanda^1,2 (AUTHOR) ; Mason, Ivy C.^3,4 (AUTHOR); Saxena, Richa^4,5,6,7 (AUTHOR)

Subjects: *GENE expression; *MOLECULAR clock; *RHYTHM

Source: PLoS Computational Biology. 9/28/2023, Vol. 19 Issue 9, p1-22. 22p. 1 Illustration, 1 Chart, 9 Graphs.

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Academic Journal

A 14th century CE Brucella melitensis genome and the recent expansion of the Western Mediterranean clade.

Authors : Long, George S.^1,2 (AUTHOR) ; Hider, Jessica^2,3 (AUTHOR) ; Duggan, Ana T.^2,3 (AUTHOR)

Subjects: *BRUCELLA melitensis; *MOLECULAR clock; *ZOONOSESITALY

Source: PLoS Pathogens. 7/31/2023, Vol. 19 Issue 7, p1-23. 23p.

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Academic Journal

Light and dark cycles modify the expression of clock genes in the ovaries of Aedes aegypti in a noncircadian manner.

Authors : Cruz, Leo Nava Piorsky Dominici¹ (AUTHOR); Teles-de-Freitas, Rayane¹ (AUTHOR); Resck, Maria Eduarda Barreto¹ (AUTHOR)

Subjects: *CLOCK genes; *MOLECULAR clock; *AEDES aegypti

Source: PLoS ONE. 10/19/2023, Vol. 18 Issue 10, p1-14. 14p.

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Academic Journal

The circadian clock gene bmal1 is necessary for co-ordinated circatidal rhythms in the marine isopod Eurydice pulchra (Leach).

Authors : Lin, Zhang¹ (AUTHOR); Green, Edward W.² (AUTHOR); Webster, Simon G.³ (AUTHOR)

Subjects: *CIRCADIAN rhythms; *MOLECULAR clock; *CLOCK genes

Source: PLoS Genetics. 10/19/2023, Vol. 19 Issue 10, p1-23. 23p.

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Examining the molecular clock hypothesis for the contemporary evolution of the rabies virus.

Assessing the effect of model specification and prior sensitivity on Bayesian tests of temporal signal.

The evolutionary and transmission dynamics of HIV-1 CRF08_BC.

Clock-dependent chromatin accessibility rhythms regulate circadian transcription.

TimeTeller: A tool to probe the circadian clock as a multigene dynamical system.

MYC disrupts transcriptional and metabolic circadian oscillations in cancer and promotes enhanced biosynthesis.

CIRCUST: A novel methodology for temporal order reconstruction of molecular rhythms; validation and application towards a daily rhythm gene expression atlas in humans.

A 14th century CE Brucella melitensis genome and the recent expansion of the Western Mediterranean clade.

Light and dark cycles modify the expression of clock genes in the ovaries of Aedes aegypti in a noncircadian manner.

The circadian clock gene bmal1 is necessary for co-ordinated circatidal rhythms in the marine isopod Eurydice pulchra (Leach).

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