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Academic Journal

Comprehensive analysis of the Xya riparia genome uncovers the dominance of DNA transposons, LTR/Gypsy elements, and their evolutionary dynamics.

  • Authors : Khan H; College of Life Sciences, Shaanxi Normal University, Xian, China.; Yuan H

Subjects: Evolution, Molecular* ; DNA Transposable Elements*/DNA Transposable Elements*/DNA Transposable Elements*/genetics ; Retroelements*

  • Source: BMC genomics [BMC Genomics] 2024 Jul 12; Vol. 25 (1), pp. 687. Date of Electronic Publication: 2024 Jul 12.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Long-read sequencing of extrachromosomal circular DNA and genome assembly of a Solanum lycopersicum breeding line revealed active LTR retrotransposons originating from S. Peruvianum L. introgressions.

  • Authors : Merkulov P; All-Russia Research Institute of Agricultural Biotechnology, 127550, Moscow, Russia.; Moscow Institute of Physics and Technology, 141701, Dolgoprudny, Russia.

Subjects: Retroelements* ; Solanum lycopersicum*/Solanum lycopersicum*/Solanum lycopersicum*/genetics ; Genome, Plant*

  • Source: BMC genomics [BMC Genomics] 2024 Apr 24; Vol. 25 (1), pp. 404. Date of Electronic Publication: 2024 Apr 24.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Breaking the limits - multichromosomal structure of an early eudicot Pulsatilla patens mitogenome reveals extensive RNA-editing, longest repeats and chloroplast derived regions among sequenced land plant mitogenomes.

  • Authors : Szandar K; Department of Botany and Nature Protection, University of Warmia and Mazury in Olsztyn, Plac Łódzki 1, 10-727, Olsztyn, Poland. .; Krawczyk K

Subjects: Evolution, Molecular* ; Genes, Plant* ; Genome, Mitochondrial*

  • Source: BMC plant biology [BMC Plant Biol] 2022 Mar 09; Vol. 22 (1), pp. 109. Date of Electronic Publication: 2022 Mar 09.Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium:

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Academic Journal

Long terminal repeats (LTR) and transcription factors regulate PHRE1 and PHRE2 activity in Moso bamboo under heat stress.

  • Authors : Papolu PK; State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, Hangzhou, 311300, Zhejiang, China.; Ramakrishnan M

Subjects: Gene Expression Regulation, Plant* ; Terminal Repeat Sequences*; Poaceae/Poaceae/Poaceae/*metabolism

  • Source: BMC plant biology [BMC Plant Biol] 2021 Dec 09; Vol. 21 (1), pp. 585. Date of Electronic Publication: 2021 Dec 09.Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium:

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Academic Journal

Genome-wide characterization of LTR retrotransposons in the non-model deep-sea annelid Lamellibrachia luymesi.

  • Authors : Aroh O; Department of Biological Sciences & Molette Biology Laboratory for Environmental and Climate Change Studies, College of Science and Mathematics, Auburn University, 101 Rouse Life Science Building, Auburn, AL, 36849, USA. .; Halanych KM

Subjects: Retroelements*/Retroelements*/Retroelements*/genetics ; Terminal Repeat Sequences*/Terminal Repeat Sequences*/Terminal Repeat Sequences*/genetics; Animals

  • Source: BMC genomics [BMC Genomics] 2021 Jun 23; Vol. 22 (1), pp. 466. Date of Electronic Publication: 2021 Jun 23.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Transcriptional dynamics of transposable elements when converting fibroblast cells of Macaca mulatta to neuroepithelial stem cells.

  • Authors : Liu D; Foshan Stomatology Hospital and School of Medicine, Foshan University, Foshan, Guangdong, 528000, China.; Liu L

Subjects: DNA Transposable Elements*/DNA Transposable Elements*/DNA Transposable Elements*/genetics ; Terminal Repeat Sequences*; Animals

  • Source: BMC genomics [BMC Genomics] 2021 Jun 04; Vol. 22 (Suppl 3), pp. 405. Date of Electronic Publication: 2021 Jun 04.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

Genome relationships and LTR-retrotransposon diversity in three cultivated Capsicum L. (Solanaceae) species.

  • Authors : de Assis R; Laboratório de Citogenética e Diversidade Vegetal, Universidade Estadual de Londrina, 86057-970, Londrina, Paraná, Brazil.; Baba VY

Subjects: Genetic Variation* ; Genome, Plant* ; Terminal Repeat Sequences*

  • Source: BMC genomics [BMC Genomics] 2020 Mar 17; Vol. 21 (1), pp. 237. Date of Electronic Publication: 2020 Mar 17.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

LtrDetector: A tool-suite for detecting long terminal repeat retrotransposons de-novo.

  • Authors : Valencia JD; The Bioinformatics Toolsmith Laboratory, Tandy School of Computer Science, University of Tulsa, 800 South Tucker Drive, Tulsa, 74104, OK, USA.; Girgis HZ

Subjects: Genome, Plant* ; Retroelements* ; Software*

  • Source: BMC genomics [BMC Genomics] 2019 Jun 03; Vol. 20 (1), pp. 450. Date of Electronic Publication: 2019 Jun 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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Academic Journal

A sensitive luminescence syncytium induction assay (LuSIA) based on a reporter plasmid containing a mutation in the glucocorticoid response element in the long terminal repeat U3 region of bovine leukemia virus.

  • Authors : Sato H; Nano Medical Engineering Laboratory, RIKEN Cluster for Pioneering Research, 2-1 Hirosawa, Wako, Saitama, 3510198, Japan.; Virus Infectious Diseases Unit, RIKEN, 2-1 Hirosawa, Wako, Saitama, 3510198, Japan.

Subjects: Mutation* ; Response Elements* ; Terminal Repeat Sequences*

  • Source: Virology journal [Virol J] 2019 May 20; Vol. 16 (1), pp. 66. Date of Electronic Publication: 2019 May 20.Publisher: BioMed Central Country of Publication: England NLM ID: 101231645 Publication Model: Electronic Cited Medium:

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Academic Journal

Quadruplex DNA in long terminal repeats in maize LTR retrotransposons inhibits the expression of a reporter gene in yeast.

  • Authors : Tokan V; Department of Plant Developmental Genetics, Institute of Biophysics, Czech Academy of Sciences, Kralovopolska 135, 61200, Brno, Czech Republic.; Puterova J

Subjects: G-Quadruplexes* ; Genes, Reporter* ; Genome, Plant*

  • Source: BMC genomics [BMC Genomics] 2018 Mar 06; Vol. 19 (1), pp. 184. Date of Electronic Publication: 2018 Mar 06.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium:

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  • 1-10 of  328 results for ""Terminal Repeat Sequences""