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Academic Journal

An automated image analysis pipeline to quantify the coordination and overlap of transcription and replication activity in mammalian genomes.

  • Authors : Lalonde M; Institute of Epigenetics and Stem Cells, Helmholtz Center Munich, Munich, Germany.; Ummethum H

Subjects: RNA Polymerase II*/RNA Polymerase II*/RNA Polymerase II*/genetics ; DNA Replication*/DNA Replication*/DNA Replication*/genetics; Animals

  • Source: Methods in cell biology [Methods Cell Biol] 2024; Vol. 182, pp. 199-219. Date of Electronic Publication: 2023 Jul 03.Publisher: Academic Press Country of Publication: United States NLM ID: 0373334 Publication Model: Print-Electronic Cited

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Academic Journal

Analysis of RNA polymerase II ubiquitylation and proteasomal degradation.

Subjects: Ubiquitination*; RNA Polymerase II/RNA Polymerase II/RNA Polymerase II/*analysis ; RNA Polymerase II/RNA Polymerase II/RNA Polymerase II/*metabolism

  • Source: Methods (San Diego, Calif.) [Methods] 2019 Apr 15; Vol. 159-160, pp. 146-156. Date of Electronic Publication: 2019 Feb 13.Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited

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Academic Journal

3.1 Å structure of yeast RNA polymerase II elongation complex stalled at a cyclobutane pyrimidine dimer lesion solved using streptavidin affinity grids.

  • Authors : Lahiri I; Department of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA 92093, USA.; Xu J

Subjects: DNA Damage*; Pyrimidine Dimers/Pyrimidine Dimers/Pyrimidine Dimers/*chemistry ; RNA Polymerase II/RNA Polymerase II/RNA Polymerase II/*chemistry

  • Source: Journal of structural biology [J Struct Biol] 2019 Sep 01; Vol. 207 (3), pp. 270-278. Date of Electronic Publication: 2019 Jun 11.Publisher: Academic Press Country of Publication: United States NLM ID: 9011206 Publication Model: Print-Electronic Cited

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Academic Journal

Transcription with a laser: Radiation-damage-free diffraction of RNA Polymerase II crystals.

  • Authors : Lin G; Department of Structural Biology, University of Pittsburgh School of Medicine, United States.; Weiss SC

Subjects: Lasers*; Crystallography/Crystallography/Crystallography/*methods ; Microscopy, Electron, Transmission/Microscopy, Electron, Transmission/Microscopy, Electron, Transmission/*methods

  • Source: Methods (San Diego, Calif.) [Methods] 2019 Apr 15; Vol. 159-160, pp. 23-28. Date of Electronic Publication: 2019 Apr 25.Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited

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Academic Journal

Genetic analysis of the RNA polymerase II CTD in Drosophila.

  • Authors : Lu F; Center for Eukaryotic Gene Regulation, Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA 16802, USA; The Huck Institutes of Life Sciences, The Pennsylvania State University, University Park, PA 16802, USA.

Subjects: Crosses, Genetic* ; Gene Editing* ; Mutation*

  • Source: Methods (San Diego, Calif.) [Methods] 2019 Apr 15; Vol. 159-160, pp. 129-137. Date of Electronic Publication: 2019 Jan 24.Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited

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Academic Journal

Profiling RNA Polymerase II Phosphorylation Genome-Wide in Fission Yeast.

  • Authors : Kecman T; Department of Biochemistry, University of Oxford, Oxford, United Kingdom.; Heo DH

Subjects: RNA Polymerase II/RNA Polymerase II/RNA Polymerase II/*metabolism ; Saccharomyces cerevisiae Proteins/Saccharomyces cerevisiae Proteins/Saccharomyces cerevisiae Proteins/*metabolism ; Schizosaccharomyces/Schizosaccharomyces/Schizosaccharomyces/*enzymology

  • Source: Methods in enzymology [Methods Enzymol] 2018; Vol. 612, pp. 489-504. Date of Electronic Publication: 2018 Aug 23.Publisher: Academic Press Country of Publication: United States NLM ID: 0212271 Publication Model: Print-Electronic Cited

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Academic Journal

Chemical Tools for Studying the Impact of cis/trans Prolyl Isomerization on Signaling: A Case Study on RNA Polymerase II Phosphatase Activity and Specificity.

  • Authors : Burkholder NT; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, United States.; Medellin B

Subjects: Signal Transduction*; Enzyme Assays/Enzyme Assays/Enzyme Assays/*methods ; Peptidylprolyl Isomerase/Peptidylprolyl Isomerase/Peptidylprolyl Isomerase/*metabolism

  • Source: Methods in enzymology [Methods Enzymol] 2018; Vol. 607, pp. 269-297. Date of Electronic Publication: 2018 Jun 23.Publisher: Academic Press Country of Publication: United States NLM ID: 0212271 Publication Model: Print-Electronic Cited

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Academic Journal

A fluorescent assay for the genetic dissection of the RNA polymerase II termination machinery.

  • Authors : Reines D; Department of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, United States. Electronic address: .

Subjects: Transcription Termination, Genetic*; Optical Imaging/Optical Imaging/Optical Imaging/*methods ; RNA Polymerase II/RNA Polymerase II/RNA Polymerase II/*metabolism

  • Source: Methods (San Diego, Calif.) [Methods] 2019 Apr 15; Vol. 159-160, pp. 124-128. Date of Electronic Publication: 2019 Jan 05.Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited

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Academic Journal

Monitoring transcriptional activity by RNA polymerase II in vitro using single molecule co-localization.

  • Authors : Ly E; Department of Biochemistry, University of Colorado, Boulder, 596 UCB, Boulder, CO 80309, USA. Electronic address: .; Goodrich JA

Subjects: Promoter Regions, Genetic* ; Transcription, Genetic*; RNA Polymerase II/RNA Polymerase II/RNA Polymerase II/*metabolism

  • Source: Methods (San Diego, Calif.) [Methods] 2019 Apr 15; Vol. 159-160, pp. 45-50. Date of Electronic Publication: 2019 Mar 13.Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited

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Academic Journal

Structural and biochemical analysis of DNA lesion-induced RNA polymerase II arrest.

  • Authors : Oh J; Division of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA 92093, United States.; Xu J

Subjects: DNA Damage* ; Transcription, Genetic*; Crystallography/Crystallography/Crystallography/*methods

  • Source: Methods (San Diego, Calif.) [Methods] 2019 Apr 15; Vol. 159-160, pp. 29-34. Date of Electronic Publication: 2019 Feb 22.Publisher: Academic Press Country of Publication: United States NLM ID: 9426302 Publication Model: Print-Electronic Cited

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  • 1-10 of  2,522 results for ""RNA Polymerase II""