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Language : english Publisher : oxford university press Subject : albumins Subject : blood plasma Subject : proteins Subject : serum albumin Filter by : Subject
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Academic Journal

MoLPC2: improved prediction of large protein complex structures and stoichiometry using Monte Carlo Tree Search and AlphaFold2.

  • Authors : Chim HY; Science for Life Laboratory and Department of Biochemistry and Biophysics, Stockholm University, Stockholm 106 91, Sweden.; Elofsson A

Subjects: Monte Carlo Method* ; Algorithms* ; Software*

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2024 Jun 03; Vol. 40 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

Multilevel superposition for deciphering the conformational variability of protein ensembles.

  • Authors : Amisaki T; Department of Biological Regulation, Faculty of Medicine, Tottori University, Yonago, Tottori 683-8503, Japan.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Molecular Dynamics Simulation*; Protein Conformation

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

GSScore: a novel Graphormer-based shell-like scoring method for protein-ligand docking.

  • Authors : Guo L; School of Computer Science and Engineering, Central South University, Rd. Lu Shan Nan, 410083, Changsha, P.R. China.; Hunan Provincial Key Lab on Bioinformatics, Central South University, Rd. Lu Shan Nan, 410083, Changsha, P.R. China.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism ; Molecular Docking Simulation*

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

Structure prediction of linear and cyclic peptides using CABS-flex.

Subjects: Peptides, Cyclic* ; Proteins*/Proteins*/Proteins*/chemistry; Peptides/Peptides/Peptides/chemistry

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Jan 22; Vol. 25 (2).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

Enhancing protein dynamics analysis with hydrophilic polyethylene glycol cross-linkers.

  • Authors : Sun M; State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Innovation Academy for Precision Measurement Science and Technology Chinese Academy of Sciences, Wuhan, Hubei 430071, China.; University of Chinese Academy of Sciences, Beijing 100039, China.

Subjects: Polyethylene Glycols*/Polyethylene Glycols*/Polyethylene Glycols*/chemistry ; Proteins*/Proteins*/Proteins*/chemistry; Mass Spectrometry

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Jan 22; Vol. 25 (2).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era.

  • Authors : Špačková A; Department of Physical Chemistry, Faculty of Science, Palacký University, tř. 17. listopadu 12, 771 46 Olomouc, Czech Republic.; Vávra O

Subjects: Databases, Protein* ; Proteins*/Proteins*/Proteins*/chemistry ; Software*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jan 05; Vol. 52 (D1), pp. D413-D418.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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Academic Journal

DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function.

  • Authors : Lee JW; Department of Computer Science, Hanyang University, Seoul 04763, Korea.; Center for Advanced Computation, Korea Institute for Advanced Study, Seoul 02455, Korea.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Software*; Protein Conformation

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Dec 01; Vol. 39 (12).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

Comprehensive assessment of protein loop modeling programs on large-scale datasets: prediction accuracy and efficiency.

  • Authors : Wang T; College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, Zhejiang, China.; Wang L

Subjects: Proteins*/Proteins*/Proteins*/chemistry; Protein Conformation

  • Source: Briefings in bioinformatics [Brief Bioinform] 2023 Nov 22; Vol. 25 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

AFsample: improving multimer prediction with AlphaFold using massive sampling.

  • Authors : Wallner B; Division of Bioinformatics, Department of Physics, Chemistry and Biology, Linköping University, SE-581 83 Linköping, Sweden.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Neural Networks, Computer*; Protein Conformation

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Sep 02; Vol. 39 (9).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

GradPose: a very fast and memory-efficient gradient descent-based tool for superimposing millions of protein structures from computational simulations.

  • Authors : Rademaker DT; Department of Medical BioSciences, Radboud University Medical Center, 6525 GA Nijmegen, The Netherlands.; van Geemen KJ

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Software*; Protein Conformation

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Aug 01; Vol. 39 (8).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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  • 1-10 of  930 results for ""Protein Conformation""