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Academic Journal

DEAttentionDTA: protein-ligand binding affinity prediction based on dynamic embedding and self-attention.

  • Authors : Chen X; Key Lab of Molecular Biophysics of Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, China.; Huang J

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism ; Protein Binding*

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2024 Jun 03; Vol. 40 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

GPSFun: geometry-aware protein sequence function predictions with language models.

  • Authors : Yuan Q; School of Computer Science and Engineering, Sun Yat-sen University, Guangzhou, Guangdong 510000, China.; Tian C

Subjects: Software* ; Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W248-W255.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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Academic Journal

GEMF: a novel geometry-enhanced mid-fusion network for PLA prediction.

  • Authors : Zhou G; School of Computer Science, Nanjing University of Posts and Telecommunications, No.9 Wenyuan Road, Jiangsu 210023, China.; Qin Y

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism ; Neural Networks, Computer*

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 May 23; Vol. 25 (4).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

Chainsaw: protein domain segmentation with fully convolutional neural networks.

  • Authors : Wells J; Centre for Artificial Intelligence, University College London, WC1E 6BT, United Kingdom.; Hawkins-Hooker A

Subjects: Neural Networks, Computer* ; Proteins*/Proteins*/Proteins*/chemistry ; Algorithms*

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2024 May 02; Vol. 40 (5).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

DeepSS2GO: protein function prediction from secondary structure.

  • Authors : Song FV; Department of Chemical Biology, School of Life Sciences, Southern University of Science and Technology, Xueyuan Avenue, 518055, Shenzhen, China.; Su J

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism ; Proteins*/Proteins*/Proteins*/genetics

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

SPDesign: protein sequence designer based on structural sequence profile using ultrafast shape recognition.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Neural Networks, Computer*; Sequence Alignment

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

EquiPNAS: improved protein-nucleic acid binding site prediction using protein-language-model-informed equivariant deep graph neural networks.

  • Authors : Roche R; Department of Computer Science, Virginia Tech, Blacksburg, VA 24061, USA.; Moussad B

Subjects: Neural Networks, Computer* ; Nucleic Acids*/Nucleic Acids*/Nucleic Acids*/chemistry ; Proteins*/Proteins*/Proteins*/chemistry

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Mar 21; Vol. 52 (5), pp. e27.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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Academic Journal

TIMED-Design: flexible and accessible protein sequence design with convolutional neural networks.

  • Authors : Castorina LV; School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh EH8 9AB United Kingdom.; Ünal SM

Subjects: Neural Networks, Computer* ; Proteins*; Amino Acid Sequence

  • Source: Protein engineering, design & selection : PEDS [Protein Eng Des Sel] 2024 Jan 29; Vol. 37.Publisher: Oxford University Press Country of Publication: England NLM ID: 101186484 Publication Model: Print Cited Medium:

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Academic Journal

Simulations of Sequence Evolution: How (Un)realistic They Are and Why.

  • Authors : Trost J; Biometry and Evolutionary Biology Laboratory (LBBE), University Claude Bernard Lyon 1, Lyon, France.; Haag J

Subjects: Proteins*/Proteins*/Proteins*/genetics ; Neural Networks, Computer*; Phylogeny

  • Source: Molecular biology and evolution [Mol Biol Evol] 2024 Jan 03; Vol. 41 (1).Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print Cited

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Academic Journal

Struct2GO: protein function prediction based on graph pooling algorithm and AlphaFold2 structure information.

  • Authors : Jiao P; School of Computer Science and Technology, Harbin Institute of Technology (Shenzhen), Shenzhen, Guang Dong 518055, China.; Wang B

Subjects: Neural Networks, Computer* ; Proteins*/Proteins*/Proteins*/chemistry; Algorithms

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Oct 03; Vol. 39 (10).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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  • 1-10 of  148 results for ""Neural Networks, Computer""