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Rapid model quality assessment for protein structure predictions using the comparison of multiple models without structural alignments.

• Authors : McGuffin LJ; School of Biological Sciences, University of Reading, Whiteknights, Reading RG6 6AS, UK. ; Roche DB

Subjects: Protein Conformation*; Computational Biology/Computational Biology/Computational Biology/*methods ; Pattern Recognition, Automated/Pattern Recognition, Automated/Pattern Recognition, Automated/*methods

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2010 Jan 15; Vol. 26 (2), pp. 182-8. Date of Electronic Publication: 2009 Nov 06.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts.

• Authors : Philipp M; Image and Signal Processing Group, Department of Computer Science, Leipzig University, Augustusplatz 10, 04109 Leipzig, Germany.; Moth CW

Subjects: Internet* ; Software* ; Mutation*

• Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W132-W139.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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BioBayesNet: a web server for feature extraction and Bayesian network modeling of biological sequence data.

• Authors : Nikolajewa S; Department of Bioinformatics, Friedrich-Schiller-University Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany.; Pudimat R

Subjects: Algorithms* ; Models, Molecular*; Computational Biology/Computational Biology/Computational Biology/*methods

• Source: Nucleic acids research [Nucleic Acids Res] 2007 Jul; Vol. 35 (Web Server issue), pp. W688-93. Date of Electronic Publication: 2007 May 30.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited

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PrDOS: prediction of disordered protein regions from amino acid sequence.

• Authors : Ishida T; Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo, 108-8639, Japan. ; Kinoshita K

Subjects: Algorithms* ; Artificial Intelligence*; Computational Biology/Computational Biology/Computational Biology/*methods

• Source: Nucleic acids research [Nucleic Acids Res] 2007 Jul; Vol. 35 (Web Server issue), pp. W460-4. Date of Electronic Publication: 2007 Jun 12.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited

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Ensemble classifier for protein fold pattern recognition.

• Authors : Shen HB; Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, Shanghai 200030, China. ; Chou KC

Subjects: Algorithms* ; Artificial Intelligence* ; Models, Chemical*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2006 Jul 15; Vol. 22 (14), pp. 1717-22. Date of Electronic Publication: 2006 May 03.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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Capturing expert knowledge with argumentation: a case study in bioinformatics.

• Authors : Jefferys BR; Division of Molecular Biosciences, Imperial College, London SW7 2AZ, UK.; Kelley LA

Subjects: Expert Systems* ; Models, Chemical*; Computational Biology/Computational Biology/Computational Biology/*methods

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2006 Apr 15; Vol. 22 (8), pp. 924-33. Date of Electronic Publication: 2006 Jan 29.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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Automated discovery of 3D motifs for protein function annotation.

• Authors : Polacco BJ; Department of Biopharmaceutical Sciences, University of California, San Francisco, 94143-2250, USA.; Babbitt PC

Subjects: Algorithms* ; Artificial Intelligence*; Pattern Recognition, Automated/Pattern Recognition, Automated/Pattern Recognition, Automated/*methods

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2006 Mar 15; Vol. 22 (6), pp. 723-30. Date of Electronic Publication: 2006 Jan 12.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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Improved prediction of protein-protein binding sites using a support vector machines approach.

• Authors : Bradford JR; School of Biochemistry and Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.; Westhead DR

Subjects: Algorithms* ; Artificial Intelligence* ; Models, Chemical*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2005 Apr 15; Vol. 21 (8), pp. 1487-94. Date of Electronic Publication: 2004 Dec 21.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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APART: automated preprocessing for NMR assignments with reduced tedium.

• Authors : Pawley NH; Los Alamos National Laboratory, Bioscience Division MS G758, Los Alamos, NM 87545, USA. ; Gans JD

Subjects: Algorithms* ; Software*; Magnetic Resonance Spectroscopy/Magnetic Resonance Spectroscopy/Magnetic Resonance Spectroscopy/*methods

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2005 Mar 01; Vol. 21 (5), pp. 680-2. Date of Electronic Publication: 2004 Sep 23.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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