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Agricola

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MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts.

• Authors : Philipp M; Image and Signal Processing Group, Department of Computer Science, Leipzig University, Augustusplatz 10, 04109 Leipzig, Germany.; Moth CW

Subjects: Internet* ; Software* ; Mutation*

• Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W132-W139.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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ProRule: a new database containing functional and structural information on PROSITE profiles.

• Authors : Sigrist CJ; Swiss Institute of Bioinformatics (SIB), 1 rue Michel Servet, CH-1211 Geneva 4, Switzerland. ; De Castro E

Subjects: Database Management Systems* ; Databases, Protein*; Information Storage and Retrieval/Information Storage and Retrieval/Information Storage and Retrieval/*methods

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2005 Nov 01; Vol. 21 (21), pp. 4060-6. Date of Electronic Publication: 2005 Aug 09.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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DisProt: a database of protein disorder.

• Authors : Vucetic S; Center for Information Science and Technology, Temple University Philadelphia, PA 19122, USA.; Obradovic Z

Subjects: Database Management Systems* ; Databases, Protein* ; PubMed*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2005 Jan 01; Vol. 21 (1), pp. 137-40. Date of Electronic Publication: 2004 Aug 13.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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PTGL--a web-based database application for protein topologies.

• Authors : May P; BCB Junior Research Group, ZIB Berlin, Takustr.7, Berlin 14195, Germany.; Barthel S

Subjects: Database Management Systems* ; Databases, Protein* ; Internet*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 Nov 22; Vol. 20 (17), pp. 3277-9. Date of Electronic Publication: 2004 Jun 24.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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The SRS 3D module: integrating structures, sequences and features.

• Authors : O'Donoghue SI; LION bioscience AG, Waldhofer Strasse 98, 69123 Heidelberg, Germany. ; Meyer JE

Subjects: Database Management Systems* ; Databases, Protein* ; Models, Molecular*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 Oct 12; Vol. 20 (15), pp. 2476-8. Date of Electronic Publication: 2004 Apr 15.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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SAD--a normalized structural alignment database: improving sequence-structure alignments.

• Authors : Marsden B; The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA. ; Abagyan R

Subjects: Algorithms* ; Database Management Systems* ; Databases, Protein*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 Oct 12; Vol. 20 (15), pp. 2333-44. Date of Electronic Publication: 2004 Apr 15.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries.

• Authors : Fischer D; Buffalo Center of Excellence in Bioinformatics, University of Buffalo, 901 Washington Street Ste. 300, Buffalo, NY 14203, USA.; Paś J

Subjects: Database Management Systems* ; Databases, Protein* ; Models, Molecular*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 Oct 12; Vol. 20 (15), pp. 2482-4. Date of Electronic Publication: 2004 Apr 08.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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Rapid 3D protein structure database searching using information retrieval techniques.

• Authors : Aung Z; Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore 117543. ; Tan KL

Subjects: Algorithms* ; Database Management Systems* ; Models, Molecular*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 May 01; Vol. 20 (7), pp. 1045-52. Date of Electronic Publication: 2004 Feb 12.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known protein three-dimensional structures.

• Authors : Yabuki Y; Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Aomi Frontier Building 17F, 2-43 Aomi, Koto-ku, Tokyo 135-0064, Japan.; Mukai Y

Subjects: Database Management Systems* ; Databases, Protein* ; Genome*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 Mar 01; Vol. 20 (4), pp. 596-8. Date of Electronic Publication: 2004 Jan 29.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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