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Protein structural class identification directly from NMR spectra using averaged chemical shifts.

• Authors : Mielke SP; Biophysics Graduate Group, University of California, Davis, CA 95616, USA.; Krishnan VV

Subjects: Databases, Protein* ; Models, Molecular* ; Protein Conformation*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2003 Nov 01; Vol. 19 (16), pp. 2054-64.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Development of a four-body statistical pseudo-potential to discriminate native from non-native protein conformations.

• Authors : Krishnamoorthy B; Department of Operations Research, CB 3180, UNC Chapel Hill, NC 27599, USA.; Tropsha A

Subjects: Algorithms* ; Models, Molecular* ; Protein Conformation*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2003 Aug 12; Vol. 19 (12), pp. 1540-8.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Local structure prediction with local structure-based sequence profiles.

• Authors : Yang AS; Department of Pharmacology, Columbia Genome Center, and Center for Computational Biology and Bioinformatics, Columbia University, 630 West 168th street, PH 7 W Room 318, New York, NY 10032, USA. ; Wang LY

Subjects: Databases, Protein* ; Models, Molecular* ; Protein Conformation*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2003 Jul 01; Vol. 19 (10), pp. 1267-74.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts.

• Authors : Philipp M; Image and Signal Processing Group, Department of Computer Science, Leipzig University, Augustusplatz 10, 04109 Leipzig, Germany.; Moth CW

Subjects: Internet* ; Software* ; Mutation*

• Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W132-W139.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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NQ-Flipper: recognition and correction of erroneous asparagine and glutamine side-chain rotamers in protein structures.

• Authors : Weichenberger CX; Center of Applied Molecular Engineering, University of Salzburg, Hellbrunnerstrasse 34, 5020 Salzburg, Austria.; Sippl MJ

Subjects: Asparagine/Asparagine/Asparagine/*chemistry ; Computational Biology/Computational Biology/Computational Biology/*methods ; Crystallography/Crystallography/Crystallography/*methods

• Source: Nucleic acids research [Nucleic Acids Res] 2007 Jul; Vol. 35 (Web Server issue), pp. W403-6. Date of Electronic Publication: 2007 May 03.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited

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Crystallographic protein model-building on the web.

• Authors : Gopal K; Department of Computer Science, Texas A&M University, 301 H.R. Bright Building, College Station, TX 77843-3112, USA. ; McKee E

Subjects: Internet* ; Models, Chemical* ; Models, Molecular*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2007 Feb 01; Vol. 23 (3), pp. 375-7. Date of Electronic Publication: 2006 Nov 30.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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Modelling sequential protein folding under kinetic control.

• Authors : Huard FP; Department of Statistics, Macquarie University, NSW 2109, Australia. ; Deane CM

Subjects: Models, Chemical* ; Models, Molecular* ; Protein Folding*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2006 Jul 15; Vol. 22 (14), pp. e203-10.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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M-ZDOCK: a grid-based approach for Cn symmetric multimer docking.

• Authors : Pierce B; Bioinformatics Program, Boston University, Boston, MA, USA.; Tong W

Subjects: Algorithms* ; Models, Chemical* ; Models, Molecular*

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2005 Apr 15; Vol. 21 (8), pp. 1472-8. Date of Electronic Publication: 2004 Dec 21.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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Protein isoelectric point as a predictor for increased crystallization screening efficiency.

• Authors : Kantardjieff KA; Department of Chemistry and Biochemistry, California State University Fullerton, Fullerton, CA 92834-6866, USA. ; Rupp B

Subjects: Models, Chemical*; Crystallization/Crystallization/Crystallization/*methods ; Crystallography/Crystallography/Crystallography/*methods

• Source: Bioinformatics (Oxford, England) [Bioinformatics] 2004 Sep 22; Vol. 20 (14), pp. 2162-8. Date of Electronic Publication: 2004 Feb 10.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print-Electronic Cited

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