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Language : english Publisher : oxford university press Subject : albumins Subject : blood plasma Subject : computational biology Subject : proteins Subject : serum albumin Filter by : Subject
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Academic Journal

αCharges: partial atomic charges for AlphaFold structures in high quality.

  • Authors : Schindler O; CEITEC - Central European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic.; National Centre for Biomolecular Research, Faculty of Science, Masaryk University, 625 00 Brno, Czech Republic.

Subjects: Software* ; Proteins*/Proteins*/Proteins*/chemistry ; Computational Biology*/Computational Biology*/Computational Biology*/instrumentation

  • Source: Nucleic acids research [Nucleic Acids Res] 2023 Jul 05; Vol. 51 (W1), pp. W11-W16.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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Academic Journal

Improving protein structure prediction using templates and sequence embedding.

  • Authors : Wu F; Institute of Computing Technology, Chinese Academy of Sciences, Beijing 626011, China.; Toyota Technological Institute at Chicago, Chicago, IL 60637, USA.

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Computational Biology*/Computational Biology*/Computational Biology*/methods; Sequence Alignment

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2023 Jan 01; Vol. 39 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

Improving protein fold recognition using triplet network and ensemble deep learning.

  • Authors : Liu Y; School of Computer Science and Engineering, Nanjing University of Science and Technology, 200 Xiaolingwei, Nanjing 210094, China.; Han K

Subjects: Deep Learning* ; Models, Molecular* ; Protein Conformation*

  • Source: Briefings in bioinformatics [Brief Bioinform] 2021 Nov 05; Vol. 22 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

OPUS-Rota4: a gradient-based protein side-chain modeling framework assisted by deep learning-based predictors.

  • Authors : Xu G; Multiscale Research Institute of Complex Systems Fudan University Shanghai, 200433, China.; Zhangjiang Fudan International Innovation Center Fudan University Shanghai, 201210, China.

Subjects: Deep Learning* ; Models, Molecular*; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: Briefings in bioinformatics [Brief Bioinform] 2022 Jan 17; Vol. 23 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

A de novo protein structure prediction by iterative partition sampling, topology adjustment and residue-level distance deviation optimization.

  • Authors : Liu J; College of Information Engineering, Zhejiang University of Technology, Hangzhou 310023, China.; Zhao KL

Subjects: Computational Biology*/Computational Biology*/Computational Biology*/methods ; Proteins*/Proteins*/Proteins*/chemistry; Software

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2021 Dec 22; Vol. 38 (1), pp. 99-107.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

MMpred: a distance-assisted multimodal conformation sampling for de novo protein structure prediction.

  • Authors : Zhao KL; College of Information Engineering, Zhejiang University of Technology, Hangzhou 310023, China.; Liu J

Subjects: Computational Biology*/Computational Biology*/Computational Biology*/methods ; Proteins*/Proteins*/Proteins*/chemistry; Protein Conformation

  • Source: Bioinformatics (Oxford, England) [Bioinformatics] 2021 Dec 07; Vol. 37 (23), pp. 4350-4356.Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium:

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Academic Journal

Assessing the performance of computational predictors for estimating protein stability changes upon missense mutations.

  • Authors : Iqbal S; Computer System Engineering from Ghulam Ishaq Khan Institute of Engineering Sciences and Technology, Pakistan.; Li F

Subjects: Mutation, Missense* ; Protein Stability* ; Software*

  • Source: Briefings in bioinformatics [Brief Bioinform] 2021 Nov 05; Vol. 22 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

Distance-guided protein folding based on generalized descent direction.

  • Authors : Wang L; College of Information Engineering, Zhejiang University of Technology, Hangzhou 310023, China.; Liu J

Subjects: Protein Folding*; Computational Biology/Computational Biology/Computational Biology/*methods ; Proteins/Proteins/Proteins/*chemistry

  • Source: Briefings in bioinformatics [Brief Bioinform] 2021 Nov 05; Vol. 22 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

A survey on computational models for predicting protein-protein interactions.

  • Authors : Hu L; Xinjiang Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, 830011, Urumqi, China.; Wang X

Subjects: Software* ; Support Vector Machine*; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: Briefings in bioinformatics [Brief Bioinform] 2021 Sep 02; Vol. 22 (5).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Academic Journal

RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences.

  • Authors : Burley SK; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA.; Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA.

Subjects: Databases, Protein* ; Protein Conformation*; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D437-D451.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

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  • 1-10 of  1,047 results for ""Protein Conformation""