Search Results

Integration analysis of ATAC-seq and RNA-seq provides insight into fatty acid biosynthesis in Schizochytrium limacinum under nitrogen limitation stress.

• Authors : Chen D; The Public Service Platform for Industrialization Development Technology of Marine Biological Medicine and Products of the State Oceanic Administration, Center of Engineering Technology Research for Microalga Germplasm Improvement of Fujian, Fujian Key Laboratory of Special Marine Bioresource Sustainable Utilization, College of Life Sciences, Fujian Normal University, Fuzhou, China.; Chen J

Subjects: Chromatin Immunoprecipitation Sequencing* ; Stramenopiles*/Stramenopiles*/Stramenopiles*/genetics ; Stramenopiles*/Stramenopiles*/Stramenopiles*/metabolism

• Source: BMC genomics [BMC Genomics] 2024 Feb 05; Vol. 25 (1), pp. 141. Date of Electronic Publication: 2024 Feb 05.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Comparative analysis reveals unexpected genome features of newly isolated Thraustochytrids strains: on ecological function and PUFAs biosynthesis.

• Authors : Song Z; Center for Marine Environmental Ecology, School of Environmental Science and Engineering, Tianjin University, Tianjin, 300072, China.; Stajich JE

Subjects: Genome*; Docosahexaenoic Acids/Docosahexaenoic Acids/Docosahexaenoic Acids/*biosynthesis ; Stramenopiles/Stramenopiles/Stramenopiles/*genetics

• Source: BMC genomics [BMC Genomics] 2018 Jul 17; Vol. 19 (1), pp. 541. Date of Electronic Publication: 2018 Jul 17.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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A pangenomic analysis of the Nannochloropsis organellar genomes reveals novel genetic variations in key metabolic genes.

• Authors : Starkenburg SR; Bioscience Division, Los Alamos National Laboratory, Los Alamos 87545, NM, USA. .; Kwon KJ

Subjects: Genome*; Stramenopiles/Stramenopiles/Stramenopiles/*genetics; ATP Synthetase Complexes/ATP Synthetase Complexes/ATP Synthetase Complexes/chemistry

• Source: BMC genomics [BMC Genomics] 2014 Mar 19; Vol. 15, pp. 212. Date of Electronic Publication: 2014 Mar 19.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history.

• Authors : Mazéas, Lisa; Bouguerba-Collin, Ahlem; Cock, J. Mark

Subjects: COMPARATIVE genomics; EXTRACELLULAR enzymes; GENE families

• Source: BMC Genomics; 10/10/2024, Vol. 25 Issue 1, p1-19, 19p

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Transcription factors in microalgae: genome-wide prediction and comparative analysis.

• Authors : Thiriet-Rupert, Stanislas; Carrier, Grégory; Chénais, Benoît

Subjects: TRANSCRIPTION factors; GENOMES; MICROALGAE

• Source: BMC Genomics; 4/11/2016, Vol. 17, p1-16, 16p, 3 Diagrams, 4 Charts, 3 Graphs

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Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes.

• Authors : Guillot, Laetitia; Delage, Ludovic; Viari, Alain

Subjects: EUKARYOTIC genomes; PROTEOMICS; BIOINFORMATICS

• Source: BMC Genomics; 1/17/2019, Vol. 20 Issue 1, p1-19, 19p, 4 Color Photographs, 3 Diagrams, 4 Charts, 2 Graphs

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The mitochondrial and chloroplast genomes of the haptophyte Chrysochromulina tobin contain unique repeat structures and gene profiles

• Authors : Hovde, Blake T; Starkenburg, Shawn R; Hunsperger, Heather M

• Source: BMC Genomics; 2014, Vol. 15 Issue 1, p604-626, 23p, 7 Diagrams, 3 Charts, 1 Graph

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Transcription factor binding specificities of the oomycete Phytophthora infestans reflect conserved and divergent evolutionary patterns and predict function.

• Authors : Vo, Nguyen N. T.; Yang, Ally; Leesutthiphonchai, Wiphawee

Subjects: TRANSCRIPTION factors; PHYTOPHTHORA infestans; BINDING sites

• Source: BMC Genomics; 7/23/2024, Vol. 25 Issue 1, p1-18, 18p

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Investigating diversity and similarity between CBM13 modules and ricin-B lectin domains using sequence similarity networks.

• Authors : De Coninck, Tibo; Gippert, Garry P.; Henrissat, Bernard

Subjects: RICIN; LECTINS; DATA mining

• Source: BMC Genomics; 6/27/2024, Vol. 25 Issue 1, p1-25, 25p

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Identification of the meiotic toolkit in diatoms and exploration of meiosis-specific SPO11 and RAD51 homologs in the sexual species and Pseudo-nitzschia multistriata and Seminavis robusta.

• Authors : Patil, Shrikant; Moeys, Sara; von Dassow, Peter

Subjects: EUKARYOTES; REPRODUCTION; MEIOSIS

• Source: BMC Genomics; 11/14/2015, Vol. 16, p1-21, 21p, 3 Diagrams, 2 Charts, 2 Graphs

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