Emerging viruses: Cross-species transmission of coronaviruses, filoviruses, henipaviruses, and rotaviruses from bats.

Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2211-1247 (Electronic) NLM ISO Abbreviation: Cell Rep Subsets: MEDLINE

Original Publication: [Cambridge, MA] : Cell Press, c 2012-

COVID-19* ; Chiroptera* ; Filoviridae*/genetics ; Henipavirus* ; Rotavirus*/genetics ; Viruses*; Animals ; Humans ; SARS-CoV-2/genetics

Emerging infectious diseases, especially if caused by bat-borne viruses, significantly affect public health and the global economy. There is an urgent need to understand the mechanism of interspecies transmission, particularly to humans. Viral genetics; host factors, including polymorphisms in the receptors; and ecological, environmental, and population dynamics are major parameters to consider. Here, we describe the taxonomy, geographic distribution, and unique traits of bats associated with their importance as virus reservoirs. Then, we summarize the origin, intermediate hosts, and the current understanding of interspecies transmission of Middle East respiratory syndrome coronavirus (MERS-CoV), severe acute respiratory syndrome coronavirus (SARS-CoV), SARS-CoV-2, Nipah, Hendra, Ebola, Marburg virus, and rotaviruses. Finally, the molecular interactions of viral surface proteins with host cell receptors are examined, and a comparison of these interactions in humans, intermediate hosts, and bats is conducted. This uncovers adaptive mutations in virus spike protein that facilitate cross-species transmission and risk factors associated with the emergence of novel viruses from bats.
Competing Interests: Declaration of interests The authors declare no competing interests.
(Copyright © 2022 The Author(s). Published by Elsevier Inc. All rights reserved.)

Infect Genet Evol. 2021 Nov;95:104898. (PMID: 33971304)
Science. 2020 Sep 4;369(6508):1261-1265. (PMID: 32753553)
Nat Rev Microbiol. 2003 Dec;1(3):209-18. (PMID: 15035025)
Nature. 2020 Mar;579(7798):270-273. (PMID: 32015507)
J Virol. 2015 Apr;89(8):4696-9. (PMID: 25653445)
J Virol. 2014 Jun;88(12):7070-82. (PMID: 24719429)
Annu Rev Anim Biosci. 2018 Feb 15;6:23-46. (PMID: 29166127)
Lancet Infect Dis. 2013 Oct;13(10):859-66. (PMID: 23933067)
mBio. 2016 Mar 01;7(2):e00019. (PMID: 26933050)
Emerg Infect Dis. 2010 Dec;16(12):1844-52. (PMID: 21122212)
Nature. 2020 Jul;583(7815):286-289. (PMID: 32380510)
Emerg Infect Dis. 2014 Jul;20(7):1231-4. (PMID: 24964193)
Dtsch Tierarztl Wochenschr. 2006 Apr;113(4):157-9. (PMID: 16716052)
Nature. 2021 Apr;592(7852):116-121. (PMID: 33106671)
Nat Chem Biol. 2009 Feb;5(2):71-2. (PMID: 19148170)
Virol Sin. 2017 Apr;32(2):101-114. (PMID: 28393313)
Science. 2005 Jan 28;307(5709):580-4. (PMID: 15681385)
Expert Opin Drug Discov. 2020 Feb;15(2):159-177. (PMID: 31809605)
Transbound Emerg Dis. 2020 Jan;67(1):121-132. (PMID: 31408582)
J Virol. 2013 Jul;87(14):7790-2. (PMID: 23678167)
Emerg Infect Dis. 2008 Dec;14(12):1974-6. (PMID: 19046545)
Arch Virol. 2010 Apr;155(4):507-14. (PMID: 20217155)
Clin Infect Dis. 2021 Jun 15;72(12):e1004-e1009. (PMID: 33252659)
Emerg Infect Dis. 2013 Jun;19(6):989-91. (PMID: 23739658)
Emerg Infect Dis. 2020 Dec;26(12):2982-2985. (PMID: 33089771)
mBio. 2014 Feb 18;5(1):. (PMID: 24549846)
Cell Rep. 2020 Dec 8;33(10):108488. (PMID: 33271063)
J Infect Dis. 2018 Nov 22;218(suppl_5):S397-S402. (PMID: 30010949)
Nat Rev Microbiol. 2006 Jan;4(1):23-35. (PMID: 16357858)
PLoS One. 2015 Apr 01;10(4):e0120535. (PMID: 25830222)
N Engl J Med. 2020 May 7;382(19):1832-1842. (PMID: 32441897)
Virus Res. 2018 May 2;250:95-103. (PMID: 29689280)
Nat Ecol Evol. 2018 Apr;2(4):659-668. (PMID: 29459707)
Arch Virol. 2010 Oct;155(10):1563-9. (PMID: 20567988)
Emerg Infect Dis. 2004 Dec;10(12):2082-7. (PMID: 15663842)
J Infect Dis. 2018 Nov 22;218(suppl_5):S287-S291. (PMID: 29920602)
Infect Genet Evol. 2018 Aug;62:95-108. (PMID: 29656042)
Lancet Infect Dis. 2014 Feb;14(2):140-5. (PMID: 24355866)
Nature. 2021 Apr;592(7854):438-443. (PMID: 33690265)
Nature. 2020 Oct;586(7830):509-515. (PMID: 32967005)
Science. 2003 Oct 10;302(5643):276-8. (PMID: 12958366)
Adv Sci (Weinh). 2018 Jul 04;5(9):1800275. (PMID: 30250786)
J Virol. 2013 Nov;87(22):12357-66. (PMID: 24027312)
Nature. 2013 Aug 8;500(7461):227-31. (PMID: 23831647)
Emerg Infect Dis. 2010 Dec;16(12):1997-9. (PMID: 21122242)
mBio. 2021 Jan 19;12(1):. (PMID: 33468689)
Ecology. 2018 May;99(5):1239-1241. (PMID: 29485693)
Adv Virus Res. 2017;98:1-55. (PMID: 28433050)
Elife. 2015 Dec 23;4:. (PMID: 26698106)
J Virol. 2022 Mar 23;96(6):e0207721. (PMID: 35225672)
Cell. 2016 Nov 3;167(4):1079-1087.e5. (PMID: 27814505)
Proc Natl Acad Sci U S A. 2021 Mar 23;118(12):. (PMID: 33658332)
Cell. 2016 Nov 3;167(4):1088-1098.e6. (PMID: 27814506)
J Clin Virol. 2008 Dec;43(4):396-400. (PMID: 18835214)
Curr Opin Virol. 2017 Jun;24:105-114. (PMID: 28601688)
Bull World Health Organ. 1978;56(2):271-93. (PMID: 307456)
J Virol. 2015 Jun;89(11):6121-5. (PMID: 25787280)
Nat Rev Dis Primers. 2017 Nov 09;3:17083. (PMID: 29119972)
Virol J. 2013 Oct 10;10:304. (PMID: 24107353)
Trends Mol Med. 2020 May;26(5):483-495. (PMID: 32359479)
Cell. 2021 May 13;184(10):2605-2617.e18. (PMID: 33831372)
Proc Natl Acad Sci U S A. 2001 May 22;98(11):6241-6. (PMID: 11353869)
Ecol Evol. 2019 Apr 12;9(9):5324-5337. (PMID: 31110682)
Emerg Infect Dis. 2006 Dec;12(12):1888-94. (PMID: 17326940)
N Engl J Med. 2012 Nov 8;367(19):1814-20. (PMID: 23075143)
Annu Rev Virol. 2016 Sep 29;3(1):237-261. (PMID: 27578435)
Emerg Infect Dis. 2021 Feb;27(2):648-650. (PMID: 33292923)
Emerg Infect Dis. 2011 May;17(5):907-9. (PMID: 21529409)
PLoS One. 2014 Feb 04;9(2):e86712. (PMID: 24504061)
Infect Genet Evol. 2018 Jan;57:166-170. (PMID: 29187315)
Nature. 2018 Apr;556(7700):255-258. (PMID: 29618817)
Virol Sin. 2021 Oct;36(5):1187-1196. (PMID: 34057680)
PLoS Pathog. 2017 Nov 30;13(11):e1006698. (PMID: 29190287)
Emerg Infect Dis. 2012 Mar;18(3):536-7. (PMID: 22377109)
Cell. 2016 Jan 14;164(1-2):258-268. (PMID: 26771495)
J Virol. 2010 Mar;84(6):2808-19. (PMID: 20071579)
Cell. 2020 Aug 20;182(4):812-827.e19. (PMID: 32697968)
Dev Biol (Basel). 2013;135:211-8. (PMID: 23689899)
Nature. 2005 Dec 1;438(7068):575-6. (PMID: 16319873)
Nat Rev Microbiol. 2020 Aug;18(8):461-471. (PMID: 32528128)
Microbes Infect. 2002 Feb;4(2):145-51. (PMID: 11880045)
Virol Sin. 2018 Feb;33(1):104-107. (PMID: 29500691)
Nature. 2013 Nov 28;503(7477):535-8. (PMID: 24172901)
Int Immunopharmacol. 2022 Apr;105:108565. (PMID: 35123183)
Curr Top Microbiol Immunol. 2005;287:1-30. (PMID: 15609507)
Zoonoses Public Health. 2010 Dec;57(7-8):499-503. (PMID: 19638160)
Vet Res. 1993;24(2):125-50. (PMID: 8393722)
Antiviral Res. 2013 Oct;100(1):246-54. (PMID: 23994189)
Emerg Infect Dis. 2004 Dec;10(12):2244-8. (PMID: 15663874)
Lancet Microbe. 2020 Sep;1(5):e218-e225. (PMID: 32838346)
Emerg Infect Dis. 2005 Jul;11(7):1042-7. (PMID: 16022778)
Cell Host Microbe. 2015 Dec 9;18(6):659-69. (PMID: 26651942)
Semin Cell Dev Biol. 2012 Feb;23(1):116-23. (PMID: 22227101)
Ann N Y Acad Sci. 2007 Apr;1102:39-50. (PMID: 17470910)
Proc Natl Acad Sci U S A. 2002 Feb 5;99(3):1431-6. (PMID: 11805285)
Emerg Infect Dis. 2007 Jan;13(1):159-61. (PMID: 17370536)
J Virol. 2014 Oct;88(19):11297-303. (PMID: 25031349)
Clin Microbiol Rev. 2006 Jul;19(3):531-45. (PMID: 16847084)
Virus Res. 2015 Apr 16;202:120-34. (PMID: 25445340)
Viruses. 2016 May 23;8(5):. (PMID: 27223296)
J Virol. 2017 Feb 14;91(5):. (PMID: 28077633)
J Virol. 2017 Jan 3;91(2):. (PMID: 27847361)
Virology. 2007 Oct 25;367(2):428-39. (PMID: 17617433)
J Virol. 2020 Sep 29;94(20):. (PMID: 32699095)
Proc Natl Acad Sci U S A. 2021 Sep 7;118(36):. (PMID: 34475219)
Emerg Microbes Infect. 2020 Dec;9(1):1567-1579. (PMID: 32602823)
Aging Cell. 2002 Dec;1(2):124-31. (PMID: 12882342)
Nature. 2013 Mar 14;495(7440):251-4. (PMID: 23486063)
Virology. 2009 Mar 1;385(1):58-67. (PMID: 19131083)
ISME J. 2016 Mar;10(3):609-20. (PMID: 26262818)
PLoS One. 2013 May 07;8(5):e64081. (PMID: 23667699)
Trends Microbiol. 2018 Jun;26(6):466-470. (PMID: 29680361)
mBio. 2017 Apr 4;8(2):. (PMID: 28377531)
Vet Microbiol. 2017 Nov;211:15-21. (PMID: 29102111)
Nature. 2020 May;581(7807):221-224. (PMID: 32225175)
Curr Opin Virol. 2018 Feb;28:7-11. (PMID: 29035743)
Science. 2020 Sep 25;369(6511):1603-1607. (PMID: 32732280)
Emerg Infect Dis. 2013 Oct;19(10):1697-9. (PMID: 24050621)
Nat Struct Mol Biol. 2008 Jun;15(6):567-72. (PMID: 18488039)
J Gen Virol. 2011 Nov;92(Pt 11):2646-2653. (PMID: 21795473)
Proc Natl Acad Sci U S A. 2020 Oct 27;117(43):26915-26925. (PMID: 33046644)
J Virol. 2020 Apr 16;94(9):. (PMID: 32075934)
Infect Genet Evol. 2014 Dec;28:1-4. (PMID: 25218875)
Emerg Infect Dis. 2016 Apr;22(4):664-70. (PMID: 26981928)
Cell Metab. 2020 Jul 7;32(1):31-43. (PMID: 32640245)
mBio. 2013 Oct 15;4(5):e00737-13. (PMID: 24129257)
Emerg Infect Dis. 2006 Apr;12(4):711-2. (PMID: 16715584)
Emerg Infect Dis. 2005 Dec;11(12):1949-51. (PMID: 16485487)
Science. 2016 Jan 1;351(6268):81-4. (PMID: 26678874)
Database (Oxford). 2014 Mar 18;2014:bau021. (PMID: 24647629)
Nature. 2020 Jul;583(7815):282-285. (PMID: 32218527)
Adv Exp Med Biol. 2017;972:35-48. (PMID: 27726073)
Cell Rep. 2018 Aug 14;24(7):1730-1737. (PMID: 30110630)
Trends Microbiol. 2004 Jun;12(6):271-8. (PMID: 15165605)
J Virol. 2010 Nov;84(21):11336-49. (PMID: 20686038)
PLoS One. 2014 Feb 03;9(2):e87912. (PMID: 24498400)
Science. 2021 May 21;372(6544):815-821. (PMID: 33853970)
Int J Antimicrob Agents. 2020 Jun;55(6):106006. (PMID: 32371096)
PLoS Pathog. 2014 Mar 13;10(3):e1004001. (PMID: 24626480)
J Gen Virol. 2019 Jun;100(6):911-912. (PMID: 31021739)
Nat Microbiol. 2016 Nov 28;2:16226. (PMID: 27892925)
PLoS Pathog. 2009 Jul;5(7):e1000536. (PMID: 19649327)
Emerg Infect Dis. 2001 May-Jun;7(3):439-41. (PMID: 11384522)
Sci Total Environ. 2021 Jul 15;778:146198. (PMID: 33714813)
J Virol. 2017 May 26;91(12):. (PMID: 28381569)
Ecology. 2020 Feb;101(2):e02937. (PMID: 31750543)
Proc Natl Acad Sci U S A. 2013 May 28;110(22):8852-7. (PMID: 23650382)
Adv Virus Res. 2011;81:85-164. (PMID: 22094080)
Biol Rev Camb Philos Soc. 2013 May;88(2):427-42. (PMID: 23279314)
Science. 2000 May 26;288(5470):1432-5. (PMID: 10827955)
Transbound Emerg Dis. 2019 Sep;66(5):2180-2183. (PMID: 31207129)
PLoS One. 2017 Mar 8;12(3):e0172621. (PMID: 28273112)
Nature. 2008 Feb 14;451(7180):818-21. (PMID: 18270539)
Emerg Infect Dis. 2019 May;25(5):1003-1006. (PMID: 31002049)
Cell. 2020 Sep 3;182(5):1295-1310.e20. (PMID: 32841599)
Annu Rev Pathol. 2017 Jan 24;12:387-418. (PMID: 27959626)
PLoS One. 2015 Oct 15;10(10):e0140670. (PMID: 26469523)
Emerg Infect Dis. 2013 Mar;19(3):456-9. (PMID: 23622767)
Emerg Infect Dis. 2014 Dec;20(12):1999-2005. (PMID: 25418529)
Trends Microbiol. 2016 Jun;24(6):490-502. (PMID: 27012512)
J Virol. 2015 Dec;89(23):11858-70. (PMID: 26378164)
Sci Rep. 2020 Sep 29;10(1):16007. (PMID: 32994418)
Indian J Virol. 2013 Dec;24(3):398-408. (PMID: 24426305)
Sci Rep. 2018 Jan 10;8(1):235. (PMID: 29321543)
Nat Rev Immunol. 2021 May;21(5):269-271. (PMID: 33649605)
Virology. 2008 Mar 15;372(2):357-71. (PMID: 18054977)
Nat Microbiol. 2020 Nov;5(11):1408-1417. (PMID: 32724171)
Proc Natl Acad Sci U S A. 2020 Nov 17;117(46):29190-29201. (PMID: 33139552)
Trends Microbiol. 2015 Aug;23(8):468-78. (PMID: 26206723)
PLoS Pathog. 2007 Jan;3(1):e5. (PMID: 17222058)
Science. 2020 May 29;368(6494):1016-1020. (PMID: 32269068)
Cell. 2016 Nov 3;167(4):892-894. (PMID: 27814518)
Nature. 2020 Oct;586(7830):560-566. (PMID: 32854108)
Science. 1972 Mar 17;175(4027):1255-6. (PMID: 4551426)
mBio. 2013 Sep 03;4(5):e00598-13. (PMID: 24003179)
J Virol. 2020 Jul 16;94(15):. (PMID: 32404529)
Nat Rev Microbiol. 2019 Mar;17(3):181-192. (PMID: 30531947)
Proc Natl Acad Sci U S A. 2005 Sep 27;102(39):14040-5. (PMID: 16169905)
Science. 2005 Sep 16;309(5742):1864-8. (PMID: 16166518)
Emerg Infect Dis. 2020 Dec;26(12):2979-2981. (PMID: 33034284)
Cell Host Microbe. 2021 Jan 13;29(1):23-31.e4. (PMID: 33306985)
Mol Biol Evol. 2016 Nov;33(11):2836-2847. (PMID: 27512112)
Viruses. 2019 Mar 19;11(3):. (PMID: 30893947)
J Virol. 2002 Apr;76(8):4087-95. (PMID: 11907248)
Virology. 2017 Jul;507:1-10. (PMID: 28384506)
Cell. 2022 Mar 31;185(7):1117-1129.e8. (PMID: 35298912)
mBio. 2022 Apr 26;13(2):e0297921. (PMID: 35352979)
Vet Microbiol. 2013 Jan 25;161(3-4):239-46. (PMID: 22959604)
Rev Med Virol. 2002 May-Jun;12(3):159-66. (PMID: 11987141)
Curr Biol. 2020 Oct 5;30(19):3896. (PMID: 33022232)
Viruses. 2020 Jan 30;12(2):. (PMID: 32019182)
Int Rev Immunol. 2017 Mar 4;36(2):108-121. (PMID: 28060559)
Nat Med. 2015 Dec;21(12):1508-13. (PMID: 26552008)
Ann N Y Acad Sci. 2020 Jun;1469(1):5-25. (PMID: 30937915)
J Virol. 2019 Nov 26;93(24):. (PMID: 31554686)
J Virol. 2005 Sep;79(18):11892-900. (PMID: 16140765)
Virus Res. 2017 Apr 15;234:58-73. (PMID: 28174054)
Zoonoses Public Health. 2019 May;66(3):288-295. (PMID: 30677236)
PLoS One. 2019 Apr 10;14(4):e0214227. (PMID: 30969980)
Nat Microbiol. 2019 Mar;4(3):390-395. (PMID: 30617348)
Ecohealth. 2016 Mar;13(1):26-38. (PMID: 26403793)
Lancet. 1999 Oct 9;354(9186):1257-9. (PMID: 10520635)
PLoS One. 2013 Apr 24;8(4):e61316. (PMID: 23637812)
N Engl J Med. 2018 Sep 27;379(13):1198-1201. (PMID: 30134126)
Cell Rep. 2020 Jan 14;30(2):308-319.e5. (PMID: 31940478)
N Engl J Med. 2014 Jun 26;370(26):2499-505. (PMID: 24896817)
Expert Opin Drug Discov. 2019 Apr;14(4):397-412. (PMID: 30849247)
mBio. 2020 Jul 21;11(4):. (PMID: 32694143)
PLoS Negl Trop Dis. 2019 Mar 18;13(3):e0007257. (PMID: 30883555)
Cell. 2020 Oct 29;183(3):739-751.e8. (PMID: 32991842)
N Engl J Med. 2020 Nov 5;383(19):1813-1826. (PMID: 32445440)
N Engl J Med. 2000 Apr 27;342(17):1229-35. (PMID: 10781618)
Curr Top Microbiol Immunol. 2017;411:323-352. (PMID: 28601947)
Infect Genet Evol. 2020 Oct;84:104367. (PMID: 32450245)
Aust Vet J. 1998 Dec;76(12):813-8. (PMID: 9972433)
Emerg Infect Dis. 2014 Dec;20(12):2093-5. (PMID: 25425139)
Nature. 2020 Jul;583(7817):578-584. (PMID: 32699395)
Virol J. 2015 Apr 11;12:57. (PMID: 25884446)
Emerg Infect Dis. 2007 Jul;13(7):1031-7. (PMID: 18214175)
Mol Biol Evol. 2022 Feb 3;39(2):. (PMID: 34951645)
Cell. 2020 Apr 16;181(2):223-227. (PMID: 32220310)
Am J Vet Res. 1965 May;26:609-16. (PMID: 14316771)
J Virol. 2015 Oct;89(20):10532-47. (PMID: 26269185)
Mol Biol Evol. 2020 Sep 1;37(9):2641-2654. (PMID: 32407507)
Nature. 2021 May;593(7858):266-269. (PMID: 33767447)
Science. 2020 Dec 18;370(6523):1464-1468. (PMID: 33184236)
Science. 2005 Oct 28;310(5748):676-9. (PMID: 16195424)
Science. 1995 Apr 7;268(5207):94-7. (PMID: 7701348)
Nature. 2020 May;581(7807):215-220. (PMID: 32225176)
J Virol. 2014 May;88(9):5195-9. (PMID: 24574399)
Nat Commun. 2020 Aug 25;11(1):4235. (PMID: 32843626)
Curr Top Microbiol Immunol. 2012;359:59-78. (PMID: 22695915)
Curr Top Microbiol Immunol. 2017;411:381-417. (PMID: 28795188)
J Equine Vet Sci. 2020 Aug;91:103149. (PMID: 32684248)

Keywords: CP: Microbiology; RNA virus; bat; interspecies transmission

Date Created: 20220609 Date Completed: 20220617 Latest Revision: 20221130

20221213

PMC9148931

10.1016/j.celrep.2022.110969

35679864