[Genetic characterisation of Powassan virus (POWV) isolated from Haemophysalis longicornis ticks in Primorye and two strains of Tick-borne encephalitis virus (TBEV) (Flaviviridae, Flavivirus): Alma-Arasan virus (AAV) isolated from Ixodes persulcatus ticks in Kazakhstan and Malyshevo virus isolated from Aedes vexans nipponii mosquitoes in Khabarovsk kray].

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  • Additional Information
    • Source:
      Publisher: FBUN T︠S︡NII Ėpidemiologii Rospotrebnadzora Country of Publication: Russia (Federation) NLM ID: 0417337 Publication Model: Print Cited Medium: Print ISSN: 0507-4088 (Print) Linking ISSN: 05074088 NLM ISO Abbreviation: Vopr Virusol Subsets: MEDLINE
    • Publication Information:
      Publication: Moskva : FBUN T︠S︡NII Ėpidemiologii Rospotrebnadzora
      Original Publication: Moskva : Ministerstvo zdravookhranenii︠a︡ SSSR
    • Subject Terms:
      Genome, Viral* ; Phylogeny*; Aedes/*virology ; Flaviviridae/*genetics ; Flaviviridae Infections/*veterinary ; Ticks/*virology ; Viral Proteins/*genetics; Amino Acid Sequence ; Animals ; Base Sequence ; Flaviviridae/classification ; Flaviviridae/isolation & purification ; Flaviviridae Infections/transmission ; Flaviviridae Infections/virology ; High-Throughput Nucleotide Sequencing ; Humans ; Kazakhstan ; Mice ; Molecular Sequence Data ; Sequence Homology, Nucleic Acid ; Siberia
    • Abstract:
      The complete genomes of the three tick-borne flaviviruses (genus Flavivirus, fam. Bunyaviridae) were sequenced: Povassan virus (POWV, strain LEIV-3070Prm, isolated from Haemophysalis logicornis in Primorsky Krai, Russia in 1977), Alma-Arasan virus (AAV, strain LEIV-1380Kaz, isolated from Ixodes persulcatus ticks in Kazakhstan in 1977) and Malyshevo virus (isolated from a pool of Aedes vexans nipponii mosquitoes, in the Khabarovsk Krai, Russia in 1978). It is shown that AAV and Malyshevo virus are the strains of Tick-borne encephalitis virus (TBEV) and belong to Sibirian and Far-Eastern genotypes, respectively (GenBank ID: AAV KJ744033; strain Malyshevo KJ744034). Phylogenetically AAV is closest related (94,6% nt and 98,3% aa identity) to TBEV strains, isolated in Sibiria (Vasilchenko, Aino, Chita-653, Irkutsk-12). Malyshevo virus is closest related (96,4% nt and 98,3% nt identity) to strains of TBEV, isolated in Far Eastern part of Russia (1230, Spassk-72, Primorye-89). POWV LEIV-3070Prm has 99.7% identity with the prototype strain POWV LB, isolated in Canada and 99.5% of isolates with Far-Eastern strains of POWV (Spassk-9 and Nadezdinsk-1991).
    • Molecular Sequence:
      GENBANK KJ744033; KJ744034
    • Accession Number:
      0 (Viral Proteins)
    • Publication Date:
      Date Created: 20150422 Date Completed: 20150505 Latest Revision: 20161109
    • Publication Date:
      20221213
    • Accession Number:
      25895206